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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Butch White | 13th | Rex Gerry | 14th | 10th |
| First Basemen | Kyle Harmon | 28th | Shawn Butler | Tied for 15th | 21st |
| Second Basemen | Felipe Cruz | 16th | Tim Smart | 9th | 13th |
| Third Basemen | Carl Aguirre | 13th | José Gutiérrez | 3rd | 7th |
| Shortstops | Emerson Elmore | 26th | Ryan Díaz | Tied for 10th | 17th |
| Left Fielders | Jesús Alfaro | 26th | Scott Matthews | 9th | 19th |
| Center Fielders | Mao Qing | 25th | Paul Cross | 22nd | 23rd |
| Right Fielders | Júlio Ortíz | 16th | Tied for 23rd | 26th | |
| Starting Pitchers | Nathan Skillenaer | 27th | Carlos Gallegos | 2nd | 25th |
| Relievers | John Hébert | 21st | Javier Romero | 28th | 26th |
| Closers | John Hébert | 2nd | Juan Arredondo | 25th | 23rd |
